PPDB

The Plant Proteome Database

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AT1G66280.1   Glycosyl hydrolase superfamily protein

Lab Annot. glycosyl hydrolase family 1 protein
Mapman: 26.3 misc.gluco-, galacto- and mannosidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66270.1 11Arabidopsis thaliana0524919629 (29)S
AT1G66270.2 11Arabidopsis thaliana0524919627 (27)S
AT3G09260.1 11Arabidopsis thaliana05278188233 (231)S
Os06g21570.1 7Oryza sativa7E-15048046630 (0)S
Os08g39860.1 7Oryza sativa3E-14748047622 (2)S
Os06g46940.2 7Oryza sativa4E-14351544600 (0)S
Zm00001eb079850_P001 agpv5Zea mays2E-14348345630 (0)S
v1_GRMZM2G163544_P02 4a53Zea mays1E-14050944590 (0)S
GRMZM2G163544_P02 3.21Zea mays1E-14050944590 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1256(2) Glyco_hydro_1(1)
TargetP: Secreted (Class 1 C0.024; M0.010; S0.971; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 524 aa (-cTP 459)
Molecular Weight 59.78 kDA(-cTP )
PI 6.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1468Detail       leaf [A. thaliana] co-IP GST stroma clpc1 x clps (rep. 2)
1613Detail       Natural Senescence leaf [A. thaliana]  
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17293592(total seedlings û light and dark grown)
17916636(root (NaCl stress))
17432890(leaf total membranes)
18814325(cotyledons)
19253305(phosphoproteins (etiolated seedling))
19334764(plasma membrane (cell culture))
19478072(Boron-interacting microsomal proteins (root))
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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