PPDB

The Plant Proteome Database

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AT1G66250.1   O-Glycosyl hydrolases family 17 protein

Lab Annot. glycosyl hydrolase family 17 protein
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01630.1 11Arabidopsis thaliana045569847 (6)S
AT2G01630.3 11Arabidopsis thaliana042070850 (0)S
AT1G11820.2 11Arabidopsis thaliana048155764 (1)S
Os03g12140.1 7Oryza sativa045569830 (0)S
Os03g12140.3 7Oryza sativa044169830 (0)_
Os03g12140.2 7Oryza sativa044169830 (0)_
Zm00001eb008930_P003 agpv5Zea mays043967820 (0)_
Zm00001eb008930_P004 agpv5Zea mays043967820 (0)_
v1_GRMZM2G111324_P02 4a53Zea mays043967822 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_17(1) X8(1)
TargetP: Secreted (Class 1 C0.009; M0.051; S0.916; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 505 aa (-cTP 488)
Molecular Weight 54.21 kDA(-cTP )
PI 5.46(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

12805588(GBI-anchored-callus)
17317660(Plasma Membrane proteome)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help