PPDB

 The Plant Proteome Database

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AT1G65730.1   YELLOW STRIPE like 7
Lab Annot.
Mapman: 34.13 transport.peptides and oligopeptides
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17650.1 11Arabidopsis thaliana070968810 (0)_
AT3G17650.2 11Arabidopsis thaliana070968810 (0)_
AT1G48370.1 11Arabidopsis thaliana067371840 (0)_
Os04g44320.1 7Oryza sativa066372840 (0)_
Os04g57840.1 7Oryza sativa067769820 (0)_
Os02g42220.1 7Oryza sativa067271842 (2)_
GRMZM5G893444_P01 3.21Zea mays068369820 (0)_
Zm00001eb426920_P004 agpv5Zea mays068369820 (0)_
v1_GRMZM2G099390_P01 4a53Zea mays068369820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF2970(3) Halogen_Hydrol(1) OPT(1) YiaAB(2)
TargetP: Cytoplasm (Class 1 C0.021; M0.075; S0.015; _0.959)
Predotar:
Subcel. Location:
TM-HMM prediction: 14 TMs
Aramemnon: 14 TMs
TAT position:
Length 688 aa (-cTP 609)
Molecular Weight 75.70 kDA(-cTP )
PI 9.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
22060019(phosphoproteome - N-starved seedlings)
20843791(DRM-enriched plasmamembrane)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help