PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G65690.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G36970.1 11Arabidopsis thaliana1E-12625572836 (6)_
AT1G54540.1 11Arabidopsis thaliana5E-5825241601 (1)_
AT2G27080.2 11Arabidopsis thaliana1E-4021533570 (0)_
Os04g58090.1 7Oryza sativa5E-4325635560 (0)_
Os09g09460.1 7Oryza sativa8E-3417539590 (0)_
Os08g23460.1 7Oryza sativa6E-3016835550 (0)_
GRMZM2G093951_P01 3.21Zea mays1E-5027841560 (0)_
Zm00001eb044970_P001 agpv5Zea mays1E-5027841560 (0)_
v1_GRMZM2G093951_P01 4a53Zea mays1E-5027841560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1)
TargetP: Chloroplast (Class 4 C0.622; M0.067; S0.012; _0.370)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 252 aa (-cTP 175)
Molecular Weight 28.57 kDA(-cTP 19.86)
PI 9.78(-cTP 9.73)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help