PPDB

PPDB	The Plant Proteome Database

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AT1G65590.1 beta-hexosaminidase 3

Lab Annot.

ATHEX1/HEXO3 (BETA-HEXOSAMINIDASE 3); beta-N-acetylhexosaminidase/ hexosaminidase
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G55260.1 11 Arabidopsis thaliana 0 549 50 65 122 (71) S
AT1G05590.3 11 Arabidopsis thaliana 7E-66 572 29 45 0 (0) S
AT1G05590.2 11 Arabidopsis thaliana 7E-66 572 29 45 0 (0) S
Os01g66700.1 7 Oryza sativa 0 511 64 80 0 (0) S
Os05g34320.2 7 Oryza sativa 0 506 65 79 24 (24) S
Os05g34320.1 7 Oryza sativa 0 506 65 79 24 (24) S
Zm00001eb365840_P004 agpv5 Zea mays 0 506 63 77 0 (0) S
Zm00001eb365840_P005 agpv5 Zea mays 0 506 63 77 0 (0) S
Zm00001eb365840_P003 agpv5 Zea mays 0 451 62 78 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_10(1) Glyco_hydro_20(1) Glyco_hydro_20b(1) Glycohydro_20b2(1)
TargetP:	Secreted (Class 1 C0.002; M0.132; S0.948; _0.074)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	535 aa (-cTP 511)
Molecular Weight	60.01 kDA(-cTP )
PI	8.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2247	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
17526915(glycoproteome cell wall (stems))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data