PPDB

PPDB	The Plant Proteome Database

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AT1G65570.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G59850.1 11 Arabidopsis thaliana 2E-143 368 51 69 0 (0) S
AT3G59850.2 11 Arabidopsis thaliana 4E-143 368 51 69 0 (0) M
AT2G43870.1 11 Arabidopsis thaliana 7E-142 368 52 68 0 (0) S
Os01g43490.1 7 Oryza sativa 2E-119 373 46 65 0 (0) S
Os01g66710.1 7 Oryza sativa 1E-103 382 42 59 0 (0) S
Os11g14410.1 7 Oryza sativa 3E-101 337 46 61 0 (0) S
Zm00001eb145110_P001 agpv5 Zea mays 4E-110 373 45 60 0 (0) S
GRMZM2G026855_P01 3.21 Zea mays 4E-110 373 45 60 0 (0) S
v1_GRMZM2G026855_P01 4a53 Zea mays 4E-110 373 45 60 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) DUF3712(1) DUF3737(1) Glyco_hydro_28(1) NosD(1) Pectate_lyase_3(2)
TargetP:	Secreted (Class 1 C0.010; M0.034; S0.968; _0.045)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	397 aa (-cTP 352)
Molecular Weight	42.72 kDA(-cTP )
PI	6.11(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data