PPDB

 The Plant Proteome Database

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AT1G65440.3   global transcription factor group B1
Lab Annot. global transcription factor group B1
Mapman: 27.3.52 RNA.regulation of transcription.Global transcription factor group
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65440.2 11Arabidopsis thaliana01402999928 (21)_
AT1G65440.1 11Arabidopsis thaliana01402999930 (22)_
AT1G65440.4 11Arabidopsis thaliana0140299990 (0)_
Os05g41510.1 7Oryza sativa01434597423 (23)_
GRMZM2G041697_P01 3.21Zea mays01419597529 (23)_
GRMZM2G041697_P03 3.21Zea mays01419597529 (23)_
Zm00001eb291590_P003 agpv5Zea mays0141959750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HHH_3(2) HHH_7(1) HHH_9(1) HTH_44(1) S1(1) SH2_2(1) SPT6_acidic(2) Tex_N(3) Tex_
TargetP: Cytoplasm (Class 4 C0.031; M0.490; S0.111; _0.721)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1454 aa (-cTP 1430)
Molecular Weight 166.40 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2240Detail       seedlings [A. thaliana] total tissue gfs9
2241Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help