PPDB

PPDB	The Plant Proteome Database

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AT1G65410.1 non-intrinsic ABC protein 11

Lab Annot.

TGD3- small ATPase involved inlipid import (ATNAP11)
Mapman: 11.15* lipid metabolism.transport

Curated Location

envelope-inner-peripheral-stromal-side (Pubmed: 23198870 17938172 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G67940.1 11 Arabidopsis thaliana 6E-28 240 34 55 0 (0) _
AT3G47790.3 11 Arabidopsis thaliana 2E-19 215 28 55 0 (0) _
AT3G47790.1 11 Arabidopsis thaliana 2E-19 215 28 55 0 (0) _
Os03g46740.2 7 Oryza sativa 1E-162 283 79 91 2 (2) C
Os03g46740.1 7 Oryza sativa 4E-162 283 79 91 2 (2) C
Os06g48060.1 7 Oryza sativa 2E-26 241 33 54 0 (0) C
Zm00001eb306900_P004 agpv5 Zea mays 3E-168 271 83 94 0 (0) M
GRMZM5G868168_P01 3.21 Zea mays 3E-168 271 83 94 19 (15) M
v1_GRMZM2G055318_P03 4a53 Zea mays 3E-168 271 83 94 11 (11) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_16(1) AAA_21(2) AAA_22(1) AAA_29(1) AAA_30(1) AAA_5(1) ABC_tran(1) Rad17(1)
TargetP:	Chloroplast (Class 2 C0.886; M0.106; S0.055; _0.050)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	345 aa (-cTP 299)
Molecular Weight	37.52 kDA(-cTP 32.57)
PI	7.64(-cTP 5.94)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
343	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19995728(proplastid (Brassica napus))
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data