PPDB

The Plant Proteome Database

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AT1G65270.1   ER membrane protein complex subunit-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65270.2 11Arabidopsis thaliana02921001008 (8)S
AT1G65270.3 11Arabidopsis thaliana02921001008 (8)S
Os11g16320.1 7Oryza sativa7E-99282557122 (22)S
v1_GRMZM2G173317_P01 4a53Zea mays2E-10228056717 (7)S
Zm00001eb168750_P001 agpv5Zea mays2E-10228056710 (0)S
GRMZM2G173317_P01 3.21Zea mays2E-10228056719 (9)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BRX(1)
TargetP: Secreted (Class 1 C0.021; M0.009; S0.983; _0.047)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 292 aa (-cTP 201)
Molecular Weight 32.53 kDA(-cTP )
PI 6.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2253Detail       seedlings [A. thaliana] total tissue atg5
2269Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
16618929(ER-LOPIT-callus)
17151019(vacuole - suspension cell)
19200160(flower-stage 12)
19546170(mature pollen grains)
17216043(leaf)
19334764(plasma membrane (cell culture))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help