PPDB

The Plant Proteome Database

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AT1G65150.1   TRAF-like family protein

Lab Annot. TRAF-like protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65150.2 11Arabidopsis thaliana02961001002 (2)C
AT1G65370.1 11Arabidopsis thaliana6E-10422665780 (0)_
AT1G65050.1 11Arabidopsis thaliana6E-8513490940 (0)M
Os12g30540.1 7Oryza sativa3E-08115265328 (28)_
Zm00001eb045760_P002 agpv5Zea mays1E-0930426420 (0)_
GRMZM2G042704_P01 3.21Zea mays1E-0930426420 (0)_
v1_GRMZM2G042704_P01 4a53Zea mays1E-0930426420 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MATH(2)
TargetP: Chloroplast (Class 5 C0.601; M0.433; S0.009; _0.091)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 296 aa (-cTP 271)
Molecular Weight 33.58 kDA(-cTP 30.86)
PI 6.01(-cTP 5.68)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2290Detail        [A. thaliana] Clp C1 TRAP
2299Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help