PPDB

PPDB	The Plant Proteome Database

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AT1G65130.1 Ubiquitin carboxyl-terminal hydrolase-related protein

Lab Annot.

ubiquitin carboxyl-terminal hydrolase-related
Mapman: 29.5.11 protein.degradation.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G65130.5 11 Arabidopsis thaliana 0 1079 99 99 0 (0) _
AT1G65130.2 11 Arabidopsis thaliana 0 1022 99 100 0 (0) _
AT1G65130.3 11 Arabidopsis thaliana 0 977 99 99 0 (0) _
Os03g06950.1 7 Oryza sativa 1E-28 710 22 40 0 (0) M
Os11g34690.1 7 Oryza sativa 2E-09 127 29 52 0 (0) C
Os11g38640.1 7 Oryza sativa 4E-09 123 30 52 0 (0) _
Zm00001eb005070_P001 agpv5 Zea mays 1E-33 326 27 48 0 (0) _
GRMZM2G314133_P01 3.21 Zea mays 2E-33 202 32 56 0 (0) _
Zm00001eb403430_P001 agpv5 Zea mays 6E-32 359 25 45 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF627(1) DUF629(1) OrsD(2) Peptidase_S64(1) zf-C2H2_4(1) zf-met(1)
TargetP:	Cytoplasm (Class 1 C0.091; M0.107; S0.012; _0.919)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1079 aa (-cTP 1025)
Molecular Weight	123.89 kDA(-cTP )
PI	5.64(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
543	Detail								leaf [A. thaliana]	stroma (FPLC) >600 kDa (HMA)	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data