PPDB

PPDB	The Plant Proteome Database

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AT1G65070.1 DNA mismatch repair protein MutS%2C type 2

Lab Annot.

DNA mismatch repair MutS protein
Mapman: 28.2 DNA.repair

Curated Location

plastid nucleoid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G65070.4 11 Arabidopsis thaliana 0 780 99 99 0 (0) C
AT1G65070.2 11 Arabidopsis thaliana 0 780 99 99 12 (8) C
AT1G65070.3 11 Arabidopsis thaliana 0 626 99 100 0 (0) C
Os04g58410.1 7 Oryza sativa 0 815 46 66 0 (0) C
Os04g58410.2 7 Oryza sativa 3E-118 486 43 61 0 (0) C
Os10g36530.1 7 Oryza sativa 2E-55 495 31 48 0 (0) S
v1_GRMZM2G348956_P01 4a53 Zea mays 0 750 49 71 13 (13) C
GRMZM2G348956_P01 3.21 Zea mays 0 750 49 71 25 (25) C
Zm00001eb065920_P001 agpv5 Zea mays 0 628 52 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_14(1) AAA_21(3) AAA_23(2) CENP-H(2) Exonuc_VII_L(2) MutS_III(1) MutS_V(1) RN
TargetP:	Chloroplast (Class 3 C0.711; M0.225; S0.013; _0.053)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	857 aa (-cTP 821) (-lTP 755)
Molecular Weight	94.57 kDA(-cTP 90.68)(-lTP 83.72)
PI	7.06(-cTP 6.50)(-lTP 7.686)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
543	Detail								leaf [A. thaliana]	stroma (FPLC) >600 kDa (HMA)	wild-type
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP
2303	Detail								[A. thaliana]		Clp C1 WT
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)
17407188(cotyledon)
20423899(chloroplast)
21515685(GreenCut2)

Comparative Proteomics Data