PPDB

PPDB	The Plant Proteome Database

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AT1G65040.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G65040.2 11 Arabidopsis thaliana 0 281 100 100 0 (0) S
AT1G65040.4 11 Arabidopsis thaliana 0 281 100 100 0 (0) S
AT1G65040.3 11 Arabidopsis thaliana 0 281 100 100 0 (0) S
Os06g19680.2 7 Oryza sativa 7E-106 227 67 81 0 (0) S
Os06g19680.1 7 Oryza sativa 2E-104 228 66 80 0 (0) S
Os07g30100.1 7 Oryza sativa 2E-22 135 40 54 0 (0) S
v1_GRMZM2G055643_P01 4a53 Zea mays 2E-114 248 65 79 3 (3) S
GRMZM2G055643_P01 3.21 Zea mays 2E-114 248 65 79 4 (4) S
Zm00001eb197180_P005 agpv5 Zea mays 3E-113 245 67 80 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5320(1) DZR(1) FANCL_C(1) Prok-RING_4(1) RINGv(1) YdjO(2) zf-ANAPC11(2) zf-C3
TargetP:	Secreted (Class 5 C0.009; M0.064; S0.822; _0.682)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	3 TMs
TAT position:
Length	281 aa (-cTP 262)
Molecular Weight	31.59 kDA(-cTP )
PI	7.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data