PPDB

The Plant Proteome Database

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AT1G65020.1   plasma protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g42630.1 7Oryza sativa4E-11332848710 (0)S
Os10g42630.2 7Oryza sativa5E-11332748710 (0)S
Os10g42630.3 7Oryza sativa3E-8024649710 (0)_
GRMZM2G053079_P01 3.21Zea mays4E-11832952720 (0)S
Zm00001eb024890_P001 agpv5Zea mays4E-11832952720 (0)S
v1_GRMZM2G053079_P01 4a53Zea mays4E-11832952720 (0)S

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NERD(1)
TargetP: Cytoplasm (Class 5 C0.040; M0.119; S0.425; _0.496)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 319 aa (-cTP 282)
Molecular Weight 35.62 kDA(-cTP )
PI 8.75(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20706207(cell cycle interactome (cell culture))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help