PPDB

 The Plant Proteome Database

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AT1G65010.1   WEB family protein (DUF827)
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G27595.1 11Arabidopsis thaliana0107160750 (0)C
AT4G27595.2 11Arabidopsis thaliana0106259750 (0)C
AT5G16730.1 11Arabidopsis thaliana3E-154649517015 (5)C
Os05g02820.1 7Oryza sativa4E-101703375620 (20)C
Os04g50204.1 7Oryza sativa3E-64671335427 (27)C
Os02g24270.1 7Oryza sativa2E-6351735550 (0)C
GRMZM2G090500_P01 3.21Zea mays2E-9374735578 (8)C
Zm00001eb024900_P002 agpv5Zea mays2E-9374735570 (0)C
v1_GRMZM2G090500_P01 4a53Zea mays2E-9374735575 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Benyvirus_14KDa(3) WEMBL(4) YopE(2)
TargetP: Chloroplast (Class 1 C0.966; M0.135; S0.004; _0.029)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1345 aa (-cTP 1266)
Molecular Weight 152.70 kDA(-cTP 144.12)
PI 4.92(-cTP 4.82)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1369Detail        [A. thaliana] chloroplast fractionation  
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1456Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2299Detail        [A. thaliana] Clp C1 TRAP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 19888209(leaves)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help