PPDB

 The Plant Proteome Database

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AT1G64970.1   gamma-tocopherol methyltransferase
Lab Annot. vte4 - tocopherol methyltransferase
Mapman: 16.1.3.5 secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol methyltransferase
Curated Location envelope (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G73600.1 11Arabidopsis thaliana7E-151733047105 (39)_
AT1G20330.1 11Arabidopsis thaliana7E-15177274329 (26)S
AT1G73600.2 11Arabidopsis thaliana8E-151723047110 (40)_
Os02g47310.1 7Oryza sativa7E-15328870827 (7)C
Os03g04340.1 7Oryza sativa3E-17246274113 (13)_
Os03g59290.1 7Oryza sativa9E-1516827440 (0)_
Zm00001eb251860_P001 agpv5Zea mays2E-15233362750 (0)C
v1_GRMZM2G035213_P01 4a53Zea mays2E-152333627515 (15)C
GRMZM2G035213_P01 3.21Zea mays2E-152333627513 (13)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ADH_zinc_N(1) CMAS(1) DREV(1) FtsJ(1) Methyltransf_11(1) Methyltransf_12(1) Meth
TargetP: Chloroplast (Class 2 C0.950; M0.252; S0.010; _0.014)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 348 aa (-cTP 298)
Molecular Weight 38.08 kDA(-cTP 32.94)
PI 6.72(-cTP 5.80)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2317Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help