PPDB

The Plant Proteome Database

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AT1G64880.1   Ribosomal protein S5 family protein

Lab Annot. Ribosomal protein S5 protein
Mapman: 29.2.1.1.3.1.5 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S5
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G33800.1 11Arabidopsis thaliana2E-181523255882 (645)C
Os02g01230.1 7Oryza sativa2E-15848751733 (3)C
Os02g01230.2 7Oryza sativa2E-15848751731 (1)C
Os03g34040.1 7Oryza sativa6E-14145325039 (39)C
Zm00001eb229290_P002 agpv5Zea mays5E-16241056760 (0)M
v1_GRMZM2G114888_P02 4a53Zea mays2E-16141056761 (1)_
GRMZM2G114888_P02 3.21Zea mays2E-16141056761 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5065(2) MtrG(2) Ribosomal_S5(1) Ribosomal_S5_C(1) STAT_int(3)
TargetP: Mitochondria (Class 5 C0.673; M0.775; S0.001; _0.005)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 515 aa (-cTP 431)
Molecular Weight 60.24 kDA(-cTP )
PI 7.12(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
19200160(flower-stage 12)
19334764(plasma membrane (cell culture))
21841088(mitochondria (2DE native gel))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help