PPDB

PPDB	The Plant Proteome Database

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AT1G64850.1 Calcium-binding EF hand family protein

Lab Annot.

Calcium-binding EF hand protein
Mapman: 30.3 signalling.calcium

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G37445.2 11 Arabidopsis thaliana 2E-09 124 29 54 0 (0) S
AT4G37445.1 11 Arabidopsis thaliana 3E-09 125 30 55 0 (0) _
Os04g51240.1 7 Oryza sativa 8E-58 162 56 77 29 (29) _
Os02g03430.1 7 Oryza sativa 1E-06 157 27 42 10 (10) _
Zm00001eb071820_P001 agpv5 Zea mays 1E-58 169 50 72 0 (0) M
GRMZM2G000397_P01 3.21 Zea mays 1E-58 169 50 72 2 (2) M
v1_GRMZM2G000397_P01 4a53 Zea mays 1E-58 169 50 72 2 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	EF-hand_1(1) EF-hand_4(2) EF-hand_5(2) EF-hand_6(1) EF-hand_7(1) EF-hand_8(1) Ze
TargetP:	Cytoplasm (Class 5 C0.020; M0.696; S0.030; _0.756)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	162 aa (-cTP 127)
Molecular Weight	18.10 kDA(-cTP )
PI	6.12(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19995728(proplastid (Brassica napus))
19329564(peroxisomes (leaf))
20061580(chloroplast envelope (inner+outer))
21173025(root proteome)

Comparative Proteomics Data