PPDB

The Plant Proteome Database

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AT1G64810.1   APO RNA-binding protein (DUF794)

Lab Annot. APO1 (accumulation PSI) ; 4Fe-4S assembly and nucleoid binding
Mapman: 29.8 protein.protein assembly and cofactor ligation
Curated Location plastid stroma (Pubmed: 23198870 15494558 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G64810.2 11Arabidopsis thaliana04361001001 (1)S
AT5G57930.1 11Arabidopsis thaliana3E-10936645642 (0)C
AT5G57930.2 11Arabidopsis thaliana4E-10936645642 (0)C
Os04g52520.1 7Oryza sativa6E-16239659771 (1)_
Os04g52520.3 7Oryza sativa1E-15633063801 (1)_
Os04g52520.2 7Oryza sativa4E-15638559761 (1)_
GRMZM2G007453_P02 3.21Zea mays4E-17936564816 (6)_
GRMZM2G007453_P01 3.21Zea mays4E-17936564816 (6)_
GRMZM2G007453_P04 3.21Zea mays4E-17936564816 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APO_RNA-bind(2) GN3L_Grn1(2) Herpes_UL92(2)
TargetP: Cytoplasm (Class 5 C0.069; M0.337; S0.074; _0.377)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 436 aa (-cTP 389)
Molecular Weight 49.63 kDA(-cTP )
PI 9.27(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help