PPDB

 The Plant Proteome Database

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AT1G64740.1   alpha-1 tubulin
Lab Annot. TUA1 (ALPHA-1 TUBULIN)
Mapman: 31.1 cell.organisation
Curated Location cytoskeleton (Pubmed: 16627697 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19780.1 11Arabidopsis thaliana04359397909 (594)_
AT5G19770.1 11Arabidopsis thaliana04359397909 (594)_
AT1G50010.1 11Arabidopsis thaliana043589951154 (640)_
Os07g38730.1 7Oryza sativa0450919756 (56)_
Os03g11970.1 7Oryza sativa045089942 (2)_
Os03g51600.1 7Oryza sativa04388994117 (117)_
GRMZM2G083243_P01 3.21Zea mays04359297177 (92)_
Zm00001eb325230_P002 agpv5Zea mays043592970 (0)_
v1_GRMZM2G083243_P01 4a53Zea mays0435929786 (83)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Tubulin(1) Tubulin_3(2) Tubulin_C(1)
TargetP: Cytoplasm (Class 3 C0.121; M0.089; S0.257; _0.696)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 450 aa (-cTP 371)
Molecular Weight 49.80 kDA(-cTP )
PI 4.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1018Detail        [aphid]  
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2049Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2052Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2053Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2145Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2147Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2218Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 17644812(plasma membrane - suspension cells)
18814325(cotyledons)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
21173025(root proteome)

Comparative Proteomics Data

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