PPDB

 The Plant Proteome Database

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AT1G64400.1   AMP-dependent synthetase and ligase family protein
Lab Annot. AMP-dependent synthetase and ligase
Mapman: 11.1.9 lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G23850.1 11Arabidopsis thaliana06527387277 (118)_
AT4G11030.1 11Arabidopsis thaliana065672830 (0)_
AT1G49430.1 11Arabidopsis thaliana0655537220 (7)_
Os01g46750.1 7Oryza sativa0655678321 (21)_
Os01g48910.1 7Oryza sativa0663668024 (24)_
Os01g48910.2 7Oryza sativa0663668024 (24)_
GRMZM2G002614_P01 3.21Zea mays0653688313 (13)_
Zm00001eb158030_P001 agpv5Zea mays065368830 (0)_
GRMZM5G861300_P01 3.21Zea mays0653688313 (13)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AMP-binding(1) AMP-binding_C(1)
TargetP: Cytoplasm (Class 2 C0.088; M0.175; S0.100; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 665 aa (-cTP 656)
Molecular Weight 74.75 kDA(-cTP )
PI 7.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to leaves)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help