PPDB

PPDB	The Plant Proteome Database

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AT1G64200.1 vacuolar H+-ATPase subunit E isoform 3

Lab Annot.

V-ATPase subunit E -putative (VATE)
Mapman: 34.1.1 transport.p- and v-ATPases.H+-transporting two-sector ATPase

Curated Location

vacuole

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G64200.2 11 Arabidopsis thaliana 1E-164 233 97 98 0 (0) _
AT1G64200.3 11 Arabidopsis thaliana 3E-136 192 99 99 0 (0) _
AT4G11150.1 11 Arabidopsis thaliana 3E-132 236 80 86 255 (174) _
Os01g46980.1 7 Oryza sativa 5E-126 236 76 86 30 (30) _
Os05g40230.1 7 Oryza sativa 2E-100 231 62 80 0 (0) _
Os01g12260.1 7 Oryza sativa 9E-96 236 63 78 0 (0) _
Zm00001eb157850_P002 agpv5 Zea mays 2E-121 236 75 84 0 (0) _
GRMZM2G030167_P01 3.21 Zea mays 4E-121 236 74 84 115 (66) _
v1_GRMZM2G030167_P01 4a53 Zea mays 4E-121 236 74 84 64 (64) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	D5_N(1) DUF1493(2) DUF4619(1) DUF5854(1) DUF848(2) vATP-synt_E(1)
TargetP:	Cytoplasm (Class 3 C0.186; M0.144; S0.153; _0.735)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	237 aa (-cTP 219)
Molecular Weight	27.08 kDA(-cTP )
PI	5.82(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
119	Detail								root [B. rapa]	plastid stroma
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1596	Detail								[A. thaliana]
1745	Detail								[A. thaliana]		Col-0
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2313	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
15539469(vacuole)
17151019(vacuole - suspension cell)
17660356(tonoplast (Brassica oleracea buds))
18436743(specific to roots)
18814325(cotyledons)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
19888209(leaves)
18445580(leaves)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data