PPDB

The Plant Proteome Database

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AT1G64110.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot. AAA domain protein
Mapman: 26.55* AAA domain
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G64110.2 11Arabidopsis thaliana08241001002 (2)S
AT1G64110.4 11Arabidopsis thaliana08241001000 (0)S
AT1G64110.5 11Arabidopsis thaliana082499990 (0)S
Os01g12660.1 7Oryza sativa080569810 (0)_
Os05g50750.1 7Oryza sativa087359730 (0)S
Os05g50750.2 7Oryza sativa083858730 (0)S
GRMZM2G013115_P01 3.21Zea mays084660750 (0)S
GRMZM2G128748_P01 3.21Zea mays084660750 (0)S
Zm00001eb344850_P004 agpv5Zea mays084660750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(1) AAA_11(2) AAA_14(1) AAA_16(2) AAA_17(1) AAA_18(1) AAA_2(1) AAA_22(1) AAA_
TargetP: Secreted (Class 5 C0.022; M0.409; S0.491; _0.187)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 824 aa (-cTP 785)
Molecular Weight 91.96 kDA(-cTP )
PI 6.45(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
18436743(specific to seeds)
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help