PPDB

PPDB	The Plant Proteome Database

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AT1G63900.1 E3 Ubiquitin ligase family protein

Lab Annot.

SUPPRESSOR OF PPI1 LOCUS1 (SP1) (E3 Ubiquitin ligase) (degrades chloroplast OE proteins)
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

envelope-outer (Pubmed: 23118188 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G63900.2 11 Arabidopsis thaliana 0 274 100 100 0 (0) S
AT1G59560.1 11 Arabidopsis thaliana 4E-137 351 57 72 0 (0) M
AT1G59560.3 11 Arabidopsis thaliana 3E-117 317 56 72 0 (0) M
Os07g45350.1 7 Oryza sativa 0 343 71 83 0 (0) M
Os07g45350.2 7 Oryza sativa 0 343 71 83 0 (0) M
Os07g45350.4 7 Oryza sativa 6E-142 268 72 83 0 (0) _
Zm00001eb329440_P006 agpv5 Zea mays 0 343 72 84 0 (0) S
GRMZM2G020574_P08 3.21 Zea mays 0 343 72 84 12 (12) S
Zm00001eb110530_P003 agpv5 Zea mays 0 343 72 85 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GIDE(1) Prok-RING_4(1) zf-C3HC4_3(1) zf-RING_2(1)
TargetP:	Secreted (Class 5 C0.062; M0.296; S0.305; _0.039)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	343 aa (-cTP 334)
Molecular Weight	37.91 kDA(-cTP )
PI	8.22(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data