PPDB

PPDB	The Plant Proteome Database

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AT1G63840.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41400.1 11 Arabidopsis thaliana 2E-67 181 63 75 0 (0) S
AT3G61460.1 11 Arabidopsis thaliana 1E-52 161 53 68 0 (0) S
AT4G11360.1 11 Arabidopsis thaliana 1E-36 153 40 57 0 (0) _
Os02g45710.1 7 Oryza sativa 9E-24 178 39 49 0 (0) S
Os04g49000.1 7 Oryza sativa 9E-23 104 46 58 0 (0) S
Os02g45780.1 7 Oryza sativa 7E-15 142 34 46 0 (0) S
v1_GRMZM2G318408_P01 4a53 Zea mays 5E-26 168 41 52 0 (0) S
GRMZM2G318408_P01 3.21 Zea mays 5E-26 168 41 52 0 (0) S
GRMZM2G397684_P01 3.21 Zea mays 2E-25 144 44 55 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_1(2) Prok-RING_4(1) Rad50_zn_hook(2) RINGv(1) UBZ_FAAP20(2)
TargetP:	Secreted (Class 2 C0.003; M0.145; S0.920; _0.068)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	166 aa (-cTP 119)
Molecular Weight	19.06 kDA(-cTP )
PI	4.99(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data