PPDB

The Plant Proteome Database

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AT1G63780.1   Ribosomal RNA processing Brix domain protein

Lab Annot. Ribosomal RNA processing Brix domain protein
Mapman: 29.2.2.50 protein.synthesis.misc ribososomal protein.BRIX
Curated Location
TAIR curated location: nucleolus & small nucleolar ribonucleoprotein complex & Cajal body & nuclear matrix14505352
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01560.1 11Arabidopsis thaliana2E-4822342560 (0)_
Os08g05880.1 7Oryza sativa2E-16029372864 (4)M
Os06g04600.2 7Oryza sativa2E-4723539560 (0)_
Os06g04600.1 7Oryza sativa1E-4222538550 (0)_
GRMZM2G066555_P03 3.21Zea mays9E-15629370852 (2)M
GRMZM2G066555_P02 3.21Zea mays9E-15629370852 (2)M
Zm00001eb226560_P002 agpv5Zea mays9E-15629370850 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Brix(1)
TargetP: Mitochondria (Class 4 C0.024; M0.725; S0.014; _0.502)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 294 aa (-cTP 261)
Molecular Weight 34.11 kDA(-cTP )
PI 9.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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