PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G63540.1   hydroxyproline-rich glycoprotein family protein
Lab Annot.
Mapman: 35.1.41 not assigned.no ontology.hydroxyproline rich proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G63530.1 11Arabidopsis thaliana7E-298576810 (0)_
AT1G63530.2 11Arabidopsis thaliana7E-298576810 (0)_
AT1G63530.4 11Arabidopsis thaliana2E-278574770 (0)_
Os12g06890.1 7Oryza sativa1E-0862517017 (17)C
Os12g06870.1 7Oryza sativa6E-085650690 (0)C
v1_GRMZM2G344924_P01 4a53Zea mays5E-11292334718 (18)C
GRMZM2G344924_P01 3.21Zea mays5E-1129233474 (4)C
Zm00001eb163070_P003 agpv5Zea mays5E-1129233470 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Extensin_2(1)
TargetP: Cytoplasm (Class 2 C0.187; M0.040; S0.011; _0.854)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 635 aa (-cTP 577)
Molecular Weight 64.11 kDA(-cTP )
PI 5.91(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help