PPDB

The Plant Proteome Database

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AT1G63250.1   DEA(D/H)-box RNA helicase family protein

Lab Annot. DEAD box RNA helicase (RH48)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G07750.1 11Arabidopsis thaliana078395970 (0)C
AT5G08610.1 11Arabidopsis thaliana0490557370 (68)C
AT5G63630.1 11Arabidopsis thaliana048655741 (1)_
Os02g57980.1 7Oryza sativa056462781 (1)_
Os01g43120.1 7Oryza sativa5E-180472527437 (37)C
Os01g43130.1 7Oryza sativa2E-17646953744 (4)_
Zm00001eb159710_P005 agpv5Zea mays047254740 (0)C
v1_GRMZM2G026371_P01 4a53Zea mays0472547492 (92)C
GRMZM2G026371_P02 3.21Zea mays0487527279 (78)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEAD(1) Helicase_C(2) PTS_IIB(1) ResIII(1)
TargetP: Mitochondria (Class 2 C0.125; M0.818; S0.012; _0.170)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 798 aa (-cTP 749)
Molecular Weight 89.59 kDA(-cTP )
PI 9.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help