PPDB

 The Plant Proteome Database

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AT1G63210.1   Transcription elongation factor Spt6
Lab Annot. Transcription elongation factor Spt6
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65440.2 11Arabidopsis thaliana01220748525 (21)_
AT1G65440.3 11Arabidopsis thaliana01220748525 (21)_
AT1G65440.1 11Arabidopsis thaliana01220748527 (22)_
Os05g41510.1 7Oryza sativa01244567323 (23)_
GRMZM2G041697_P01 3.21Zea mays01224587423 (23)_
GRMZM2G041697_P03 3.21Zea mays01224587423 (23)_
Zm00001eb291590_P003 agpv5Zea mays0122458740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HHH_3(3) HHH_7(1) HHH_9(1) HTH_44(1) SH2(2) SH2_2(1) Tex_N(2) YqgF(1)
TargetP: Cytoplasm (Class 4 C0.031; M0.492; S0.061; _0.789)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1197 aa (-cTP 1192)
Molecular Weight 138.13 kDA(-cTP )
PI 5.98(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help