PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G63170.1 Zinc finger%2C C3HC4 type (RING finger) family protein

Lab Annot.

Zinc finger, C3HC4 type (RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12760.1 11 Arabidopsis thaliana 0 363 77 84 0 (0) C
AT1G12760.2 11 Arabidopsis thaliana 3E-169 338 77 84 0 (0) _
AT4G11680.1 11 Arabidopsis thaliana 8E-164 357 66 76 0 (0) C
Os02g45240.1 7 Oryza sativa 8E-144 354 62 76 0 (0) C
Os04g48050.1 7 Oryza sativa 2E-135 326 62 75 0 (0) _
Os07g27950.2 7 Oryza sativa 5E-121 342 61 70 0 (0) C
Zm00001eb073720_P001 agpv5 Zea mays 2E-142 353 61 75 0 (0) C
v1_GRMZM2G072462_P01 4a53 Zea mays 2E-142 353 61 75 0 (0) C
GRMZM2G072462_P01 3.21 Zea mays 2E-142 353 61 75 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4131(2) DUF755(1) MgtE(2) SR-25(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf
TargetP:	Chloroplast (Class 5 C0.496; M0.284; S0.012; _0.449)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	5 TMs
Aramemnon:	5 TMs
TAT position:
Length	381 aa (-cTP 327)
Molecular Weight	42.68 kDA(-cTP 36.65)
PI	4.99(-cTP 4.62)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data