PPDB

PPDB	The Plant Proteome Database

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AT1G63160.1 replication factor C 2

Lab Annot.

replication factor C 40 kDa, putative
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G21690.1 11 Arabidopsis thaliana 2E-66 315 40 56 2 (2) _
AT1G21690.4 11 Arabidopsis thaliana 1E-64 314 40 55 0 (0) _
AT1G21690.2 11 Arabidopsis thaliana 2E-63 315 40 54 2 (2) _
Os04g48060.1 7 Oryza sativa 0 331 85 93 7 (7) _
Os12g07720.1 7 Oryza sativa 4E-66 328 38 57 2 (2) _
Os02g53500.2 7 Oryza sativa 3E-64 328 37 55 5 (5) _
GRMZM6G798998_P02 3.21 Zea mays 0 321 87 95 25 (16) _
Zm00001eb428750_P002 agpv5 Zea mays 0 321 87 95 0 (0) _
Zm00001eb428750_P001 agpv5 Zea mays 2E-138 208 88 97 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_11(1) AAA_14(1) AAA_16(2) AAA_18(1) AAA_19(2) AAA_22(2) AAA_24(1) AAA
TargetP:	Cytoplasm (Class 3 C0.331; M0.051; S0.055; _0.819)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	333 aa (-cTP 330)
Molecular Weight	36.75 kDA(-cTP )
PI	7.59(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data