PPDB

The Plant Proteome Database

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AT1G62980.1   expansin A18

Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12560.1 11Arabidopsis thaliana1E-12824770840 (0)S
AT3G55500.1 11Arabidopsis thaliana5E-9525253710 (0)S
AT2G37640.1 11Arabidopsis thaliana1E-9423057731 (1)S
Os10g39110.1 7Oryza sativa1E-10825060730 (0)S
Os03g60720.1 7Oryza sativa2E-9123156714 (4)S
Os01g16770.1 7Oryza sativa4E-8621557730 (0)_
Zm00001eb393650_P001 agpv5Zea mays2E-11023862750 (0)S
v1_GRMZM2G127029_P01 4a53Zea mays2E-11023862750 (0)S
GRMZM2G127029_P01 3.21Zea mays2E-11023862750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(2) Expansin_C(1)
TargetP: Secreted (Class 2 C0.002; M0.225; S0.845; _0.230)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 257 aa (-cTP 170)
Molecular Weight 27.87 kDA(-cTP )
PI 9.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help