PPDB

 The Plant Proteome Database

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AT1G62940.1   acyl-CoA synthetase 5
Lab Annot. At4CL10 - 4-coumarate--CoA ligase
Mapman: 16.2 secondary metabolism.phenylpropanoids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21240.1 11Arabidopsis thaliana8E-13453939610 (0)_
AT4G05160.1 11Arabidopsis thaliana6E-1285413860115 (44)_
AT1G65060.1 11Arabidopsis thaliana7E-12252938581 (0)_
Os04g24530.1 7Oryza sativa053363790 (0)_
Os04g24530.2 7Oryza sativa045965800 (0)_
Os02g08100.1 7Oryza sativa2E-134536406020 (20)_
v1_GRMZM2G145179_P01 4a53Zea mays054763800 (0)C
GRMZM2G145179_P01 3.21Zea mays054763800 (0)C
Zm00001eb083110_P001 agpv5Zea mays054763800 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AMP-binding(1) AMP-binding_C(1)
TargetP: Cytoplasm (Class 2 C0.086; M0.147; S0.143; _0.851)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 542 aa (-cTP 442)
Molecular Weight 59.17 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to flower)
19200160(flower-stage 12)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help