PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G62930.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G63130.1 11Arabidopsis thaliana060485910 (0)M
AT1G63130.2 11Arabidopsis thaliana060485910 (0)M
AT1G62670.1 11Arabidopsis thaliana062282890 (0)M
Os10g35240.1 7Oryza sativa8E-11155133560 (0)M
Os10g35240.2 7Oryza sativa8E-11155133560 (0)M
Os10g35436.1 7Oryza sativa2E-10957933550 (0)M
v1_GRMZM2G431850_P01 4a53Zea mays4E-10756331560 (0)M
GRMZM2G431850_P01 3.21Zea mays4E-10756331560 (0)M
Zm00001eb345130_P001 agpv5Zea mays4E-10756331560 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AEP1(3) APAF1_C(3) ATP13(6) Clathrin(1) DED(2) ECSIT(3) MRP-S27(5) Mtf2(3) PPR(1
TargetP: Mitochondria (Class 4 C0.247; M0.507; S0.061; _0.155)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 629 aa (-cTP 588)
Molecular Weight 70.92 kDA(-cTP )
PI 8.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help