PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G62880.1 Cornichon family protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology; 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12390.1 11 Arabidopsis thaliana 7E-82 137 81 92 0 (0) S
AT1G12340.1 11 Arabidopsis thaliana 4E-69 116 82 93 0 (0) _
AT4G12090.1 11 Arabidopsis thaliana 1E-54 134 57 80 0 (0) S
Os06g04500.1 7 Oryza sativa 3E-45 134 54 79 2 (2) S
Os12g32180.1 7 Oryza sativa 6E-40 130 52 69 0 (0) S
Os06g04500.2 7 Oryza sativa 4E-38 107 60 80 2 (2) _
GRMZM2G073023_P02 3.21 Zea mays 3E-52 134 55 79 4 (4) S
GRMZM2G073023_P01 3.21 Zea mays 3E-52 134 55 79 4 (4) S
Zm00001eb270040_P001 agpv5 Zea mays 3E-52 134 55 79 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cornichon(1) DUF2556(1) PhoR(3) Sigma_reg_N(3)
TargetP:	Secreted (Class 1 C0.001; M0.021; S0.977; _0.108)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	3 TMs
TAT position:
Length	137 aa (-cTP 109)
Molecular Weight	16.44 kDA(-cTP )
PI	4.84(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data