PPDB

The Plant Proteome Database

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AT1G62740.1   stress-inducible protein

Lab Annot. HOP-2 (partner with HSP90)
Mapman: 29.6 protein.folding
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12270.1 11Arabidopsis thaliana0573819189 (46)_
AT4G12400.2 11Arabidopsis thaliana057273868 (6)_
AT4G12400.1 11Arabidopsis thaliana053673866 (4)_
Os02g43020.1 7Oryza sativa0578708390 (90)_
Os04g45480.1 7Oryza sativa057565800 (0)_
Os06g06760.3 7Oryza sativa6E-9526355750 (0)_
v1_GRMZM2G162688_P01 4a53Zea mays0580678256 (56)_
Zm00001eb248730_P001 agpv5Zea mays058067820 (0)_
GRMZM2G162688_P01 3.21Zea mays0580678263 (57)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Alkyl_sulf_dimr(2) ANAPC3(3) BTAD(3) Coatomer_E(3) DNA_meth_N(2) DUF2225(2) DUF3
TargetP: Cytoplasm (Class 5 C0.394; M0.127; S0.099; _0.544)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 571 aa (-cTP 515)
Molecular Weight 64.52 kDA(-cTP )
PI 5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1567Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18599647(seed proteome)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
20118269(developing seeds)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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