PPDB

PPDB	The Plant Proteome Database

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AT1G62740.1 stress-inducible protein

Lab Annot.

HOP-2 (partner with HSP90)
Mapman: 29.6 protein.folding

Curated Location

cytosol

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12270.1 11 Arabidopsis thaliana 0 573 81 91 95 (46) _
AT4G12400.2 11 Arabidopsis thaliana 0 572 73 86 8 (6) _
AT4G12400.1 11 Arabidopsis thaliana 0 536 73 86 6 (4) _
Os02g43020.1 7 Oryza sativa 0 578 70 83 90 (90) _
Os04g45480.1 7 Oryza sativa 0 575 65 80 0 (0) _
Os06g06760.3 7 Oryza sativa 6E-95 263 55 75 0 (0) _
v1_GRMZM2G162688_P01 4a53 Zea mays 0 580 67 82 56 (56) _
Zm00001eb248730_P001 agpv5 Zea mays 0 580 67 82 0 (0) _
GRMZM2G162688_P01 3.21 Zea mays 0 580 67 82 99 (57) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alkyl_sulf_dimr(2) ANAPC3(3) BTAD(3) Coatomer_E(3) DNA_meth_N(2) DUF2225(2) DUF3
TargetP:	Cytoplasm (Class 5 C0.394; M0.127; S0.099; _0.544)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	571 aa (-cTP 515)
Molecular Weight	64.52 kDA(-cTP )
PI	5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1567	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k2k3
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18599647(seed proteome)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
20118269(developing seeds)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data