PPDB

PPDB	The Plant Proteome Database

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AT1G62680.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G62680.2 11 Arabidopsis thaliana 0 548 100 100 0 (0) C
AT1G63130.1 11 Arabidopsis thaliana 0 603 54 69 0 (0) M
AT1G63130.2 11 Arabidopsis thaliana 0 603 54 69 0 (0) M
Os10g35240.1 7 Oryza sativa 7E-88 470 31 55 0 (0) M
Os10g35240.2 7 Oryza sativa 7E-88 470 31 55 0 (0) M
Os03g06910.1 7 Oryza sativa 8E-85 447 33 55 0 (0) M
v1_GRMZM2G431850_P01 4a53 Zea mays 1E-87 470 30 56 0 (0) M
GRMZM2G431850_P01 3.21 Zea mays 1E-87 470 30 56 0 (0) M
Zm00001eb345130_P001 agpv5 Zea mays 1E-87 470 30 56 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(2) ATP13(4) Coatomer_E(2) DUF3368(3) ECSIT(3) MRP-S27(3) PPR(14) PPR_1(12)
TargetP:	Chloroplast (Class 5 C0.763; M0.606; S0.003; _0.015)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	548 aa (-cTP 506)
Molecular Weight	61.45 kDA(-cTP 56.61)
PI	8.73(-cTP 8.20)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data