PPDB

The Plant Proteome Database

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AT1G62440.1   leucine-rich repeat/extensin 2

Lab Annot.
Mapman: 10.5.3 cell wall.cell wall proteins.LRR
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12040.1 11Arabidopsis thaliana038182883 (3)S
AT3G24480.1 11Arabidopsis thaliana3E-15935065760 (0)S
AT4G13340.1 11Arabidopsis thaliana2E-15034365764 (4)S
Os06g49100.1 7Oryza sativa6E-13133959730 (0)S
Os02g04540.1 7Oryza sativa4E-13034259710 (0)S
Os01g41120.1 7Oryza sativa3E-12734453690 (0)S
v1_GRMZM2G034550_P01 4a53Zea mays3E-133392546711 (10)C
Zm00001eb231880_P001 agpv5Zea mays7E-13339255670 (0)C
Zm00001eb161110_P001 agpv5Zea mays7E-13134254700 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_1(7) LRR_4(3) LRR_8(4) LRRNT_2(1)
TargetP: Secreted (Class 1 C0.003; M0.027; S0.984; _0.031)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 786 aa (-cTP 763)
Molecular Weight 85.48 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data


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