PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G62430.1   CDP-diacylglycerol synthase 1

Lab Annot. CDP-diacylglycerol synthase 1
Mapman: 11.3.3 lipid metabolism.Phospholipid synthesis.phosphatidate cytidylyltransferase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22340.1 11Arabidopsis thaliana042079880 (0)_
AT4G22340.3 11Arabidopsis thaliana042079880 (0)S
AT4G22340.2 11Arabidopsis thaliana036284910 (0)S
Os01g55360.1 7Oryza sativa041974850 (0)_
Os01g55360.2 7Oryza sativa041974850 (0)_
Os01g55360.3 7Oryza sativa041974850 (0)_
GRMZM5G825110_P02 3.21Zea mays042072850 (0)_
Zm00001eb370580_P004 agpv5Zea mays042072850 (0)_
Zm00001eb370580_P001 agpv5Zea mays042072850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CTP_transf_1(1) Fzo_mitofusin(2)
TargetP: Cytoplasm (Class 3 C0.252; M0.102; S0.023; _0.777)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 8 TMs
TAT position:
Length 421 aa (-cTP 399)
Molecular Weight 48.66 kDA(-cTP )
PI 9.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1574Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

19253305(phosphoproteins (etiolated seedling))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help