PPDB

 The Plant Proteome Database

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AT1G62350.1   Pentatricopeptide repeat (PPR) superfamily protein
Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G62350.2 11Arabidopsis thaliana5E-1421961001000 (0)M
AT1G62350.3 11Arabidopsis thaliana1E-98141991000 (0)_
AT3G46870.1 11Arabidopsis thaliana3E-5718147710 (0)C
Os03g18620.1 7Oryza sativa2E-8419265780 (0)M
Os07g36450.1 7Oryza sativa8E-5518145700 (0)M
Os04g39970.1 7Oryza sativa2E-1512933540 (0)M
GRMZM2G041930_P05 3.21Zea mays3E-8519366780 (0)M
GRMZM2G041930_P03 3.21Zea mays3E-8519366780 (0)M
Zm00001eb144720_P001 agpv5Zea mays3E-8519366780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PPR(2) PPR_2(2) Ssu72(1)
TargetP: Cytoplasm (Class 5 C0.142; M0.372; S0.041; _0.472)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 196 aa (-cTP 161)
Molecular Weight 23.29 kDA(-cTP )
PI 5.05(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help