PPDB

The Plant Proteome Database

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AT1G62040.1   Ubiquitin-like superfamily protein

Lab Annot. ATG8c - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G05630.1 11Arabidopsis thaliana3E-7211885950 (0)_
AT4G21980.2 11Arabidopsis thaliana2E-7111787941 (1)C
AT4G21980.1 11Arabidopsis thaliana2E-7111787941 (1)_
Os08g09240.2 7Oryza sativa5E-7811891980 (0)_
Os08g09240.1 7Oryza sativa5E-7811891980 (0)_
Os04g53240.1 7Oryza sativa2E-7411987950 (0)_
Zm00001eb171400_P002 agpv5Zea mays2E-7711989970 (0)_
Zm00001eb171400_P003 agpv5Zea mays2E-7711989970 (0)_
GRMZM2G134613_P02 3.21Zea mays3E-77118909717 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG12(1) Atg8(1)
TargetP: Cytoplasm (Class 4 C0.136; M0.254; S0.033; _0.611)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 119 aa (-cTP 31)
Molecular Weight 13.73 kDA(-cTP )
PI 8.83(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help