PPDB

The Plant Proteome Database

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AT1G61940.1   tubby like protein 4

Lab Annot.
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G61940.2 11Arabidopsis thaliana2E-12727770730 (0)_
AT2G47900.1 11Arabidopsis thaliana8E-306186930 (0)_
AT2G47900.2 11Arabidopsis thaliana8E-306186930 (0)_
Os03g22800.1 7Oryza sativa9E-226170830 (0)M
Os11g06420.1 7Oryza sativa5E-216163810 (0)M
Os12g06630.3 7Oryza sativa8E-216162750 (0)_
GRMZM2G001272_P03 3.21Zea mays6E-226167800 (0)M
v1_GRMZM2G001272_P03 4a53Zea mays6E-226167800 (0)M
Zm00001eb202420_P001 agpv5Zea mays1E-216165810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(2) F-box-like(2) FBD(1) Tub(2)
TargetP: Cytoplasm (Class 2 C0.152; M0.096; S0.037; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 244 aa (-cTP 216)
Molecular Weight 28.04 kDA(-cTP )
PI 9.10(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help