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AT1G61870.1 pentatricopeptide repeat 336

Lab Annot.

PPR336 (PENTATRICOPEPTIDE REPEAT 336)
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G11630.1 11 Arabidopsis thaliana 0 408 70 82 0 (0) M
AT1G55890.1 11 Arabidopsis thaliana 3E-60 385 31 54 24 (13) M
AT4G36680.1 11 Arabidopsis thaliana 5E-58 390 30 55 1 (0) M
Os01g58080.3 7 Oryza sativa 2E-122 395 47 65 0 (0) M
Os01g58080.1 7 Oryza sativa 2E-122 395 47 65 0 (0) M
Os01g58080.2 7 Oryza sativa 2E-122 395 47 65 0 (0) M
AC233851.1_FGP014 3.21 Zea mays 6E-119 398 47 64 3 (3) C
Zm00001eb151070_P002 agpv5 Zea mays 6E-119 398 47 64 0 (0) C
Zm00001eb151070_P001 agpv5 Zea mays 6E-119 398 47 64 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ECSIT(3) GGA_N-GAT(3) PPR(8) PPR_1(7) PPR_2(8) PPR_3(3) PPR_long(2)
TargetP:	Mitochondria (Class 5 C0.607; M0.621; S0.012; _0.003)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	408 aa (-cTP 367)
Molecular Weight	45.76 kDA(-cTP )
PI	8.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data