PPDB

The Plant Proteome Database

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AT1G61760.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05220.1 11Arabidopsis thaliana2E-8822052732 (2)_
AT5G22870.1 11Arabidopsis thaliana2E-1716628460 (0)_
AT2G35460.1 11Arabidopsis thaliana6E-1716828510 (0)_
Os07g34720.1 7Oryza sativa9E-4519135520 (0)M
Os04g53650.1 7Oryza sativa5E-2719834550 (0)C
Os04g33990.1 7Oryza sativa6E-1516822484 (4)S
Zm00001eb323160_P001 agpv5Zea mays2E-4319233550 (0)M
GRMZM2G339907_P01 3.21Zea mays2E-4319233550 (0)M
v1_GRMZM2G339907_P01 4a53Zea mays2E-4319233550 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1)
TargetP: Chloroplast (Class 5 C0.522; M0.056; S0.039; _0.399)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 224 aa (-cTP 200)
Molecular Weight 25.87 kDA(-cTP 23.13)
PI 10.04(-cTP 9.88)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help