PPDB

The Plant Proteome Database

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AT1G61580.1   R-protein L3 B

Lab Annot. ARP2/RPL3 ( RIBOSOMAL PROTEIN 2); structural constituent of ribosome
Mapman: 29.2.1.2.2.3 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3
Curated Location cytosol

TAIR curated location: cytosolic large ribosomal subunit (sensu Eukaryota)2227432
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G43170.1 11Arabidopsis thaliana03898694534 (442)_
AT1G43170.3 11Arabidopsis thaliana03898694534 (442)_
AT1G43170.6 11Arabidopsis thaliana03898694476 (384)_
Os12g07010.1 7Oryza sativa0386849343 (43)C
Os11g06750.1 7Oryza sativa0386849342 (42)C
Zm00001eb091870_P004 agpv5Zea mays038685930 (0)C
Zm00001eb091870_P001 agpv5Zea mays038685930 (0)C
v1_GRMZM2G324314_P01 4a53Zea mays0386859393 (92)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: bZIP_Maf(1) Ribosomal_L3(1) TBD(1)
TargetP: Mitochondria (Class 5 C0.340; M0.472; S0.013; _0.278)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 390 aa (-cTP 369)
Molecular Weight 44.55 kDA(-cTP )
PI 10.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1535Detail       leaf [A. thaliana] wild-type
2236Detail       seedlings [A. thaliana] total tissue gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17934214(cytosolic ribosome)
17432890(leaf total membranes)
19546170(mature pollen grains)
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21325567(root-proteome (wt & det3))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help