PPDB

 The Plant Proteome Database

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AT1G61570.1   translocase of the inner mitochondrial membrane 13
Lab Annot. TIM13; P-P-bond-hydrolysis-driven protein transmembrane transporter
Mapman: 29.3.2 protein.targeting.mitochondria
Curated Location mitochondria (Pubmed: 14730085 )

TAIR curated location: mitochondrion & mitochondrial intermembrane space14671022,14730085
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50810.1 11Arabidopsis thaliana3E-0671336118 (15)_
AT2G29530.1 11Arabidopsis thaliana7E-0658365032 (28)_
AT2G29530.2 11Arabidopsis thaliana7E-0658365032 (28)_
Os02g45820.1 7Oryza sativa2E-2367708622 (22)_
Os04g49220.1 7Oryza sativa2E-084953690 (0)_
Os11g03710.1 7Oryza sativa3E-076238560 (0)_
v1_GRMZM2G058432_P01 4a53Zea mays6E-2769739125 (24)C
Zm00001eb250750_P001 agpv5Zea mays6E-276973910 (0)C
GRMZM2G058432_P01 3.21Zea mays6E-2769739133 (33)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: zf-Tim10_DDP(1)
TargetP: Cytoplasm (Class 5 C0.609; M0.058; S0.100; _0.655)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 87 aa (-cTP 68)
Molecular Weight 9.41 kDA(-cTP )
PI 5.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1351Detail       leaf [A. thaliana] total tissue t1-t2
1356Detail       leaf [A. thaliana] total tissue - low mass region wild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1420Detail        [A. thaliana]  
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1596Detail        [A. thaliana]  
1650Detail       leaf [A. thaliana] plastoglobules plastoglobulem48
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2246Detail       seedlings [A. thaliana] total tissue gfs9
2306Detail        [A. thaliana] Clp C1 TRAP
2317Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
19546170(mature pollen grains)
20018591(strong Cu2+ binding (mitochondria - cell culture))
20706207(contaminants cell cycle interactome (cell culture))
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

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