PPDB

PPDB	The Plant Proteome Database

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AT1G61290.1 syntaxin of plants 124

Lab Annot.

SYP124 (syntaxin 124); SNAP receptor - cytosol & plasma membrane
Mapman: 31.4 cell.vesicle transport

Curated Location

cytosol (Pubmed: 19098073 15342965 )
plasma membrane (Pubmed: 19098073 15342965 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G61290.2 11 Arabidopsis thaliana 0 303 100 100 0 (0) _
AT1G11250.1 11 Arabidopsis thaliana 0 303 89 95 0 (0) _
AT4G03330.1 11 Arabidopsis thaliana 4E-147 305 67 81 0 (0) _
Os06g39050.1 7 Oryza sativa 9E-155 305 68 84 0 (0) _
Os02g11890.1 7 Oryza sativa 4E-144 288 68 82 0 (0) _
Os03g57310.1 7 Oryza sativa 5E-110 288 55 76 1 (1) _
v1_GRMZM2G416733_P01 4a53 Zea mays 5E-156 297 71 84 1 (0) _
GRMZM2G095441_P01 3.21 Zea mays 5E-151 304 68 82 2 (2) _
v1_GRMZM2G095441_P01 4a53 Zea mays 5E-151 304 68 82 2 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CCDC-167(1) DASH_Dam1(3) DUF1664(2) DUF2408(3) DUF5790(3) Enkurin(3) Erp_C(2) Fi
TargetP:	Cytoplasm (Class 2 C0.054; M0.153; S0.144; _0.901)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	303 aa (-cTP 287)
Molecular Weight	34.47 kDA(-cTP )
PI	6.06(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data