PPDB

The Plant Proteome Database

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AT1G61250.2   secretory carrier 3

Lab Annot. SC3 (SECRETORY CARRIER 3); transmembrane transporter
Mapman: 34.99 transport.misc
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G61250.1 11Arabidopsis thaliana026110010013 (13)_
AT1G11180.1 11Arabidopsis thaliana6E-16526385901 (1)_
AT1G11180.3 11Arabidopsis thaliana1E-15925684900 (0)_
Os07g37740.1 7Oryza sativa2E-13728368790 (0)_
Os01g57220.1 7Oryza sativa5E-13026372840 (0)_
Os05g42330.1 7Oryza sativa2E-122261718317 (17)_
GRMZM2G041181_P01 3.21Zea mays2E-14228270801 (1)_
Zm00001eb324430_P001 agpv5Zea mays2E-14228270800 (0)_
v1_GRMZM2G041181_P01 4a53Zea mays2E-14228270801 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNase_Y_N(1) SCAMP(1)
TargetP: Cytoplasm (Class 4 C0.389; M0.098; S0.080; _0.691)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 274 aa (-cTP 255)
Molecular Weight 30.94 kDA(-cTP )
PI 7.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1420Detail        [A. thaliana]  
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1712Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1716Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1

* For details about the exprimental sources click here.

Published Proteomics Data

21826108(SYP trans-Golgi-filtered)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help