PPDB

The Plant Proteome Database

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AT1G61250.1   secretory carrier 3

Lab Annot. SC3 (SECRETORY CARRIER 3); transmembrane transporter
Mapman: 34.99 transport.misc
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G61250.2 11Arabidopsis thaliana02611001009 (9)_
AT1G11180.1 11Arabidopsis thaliana029184901 (1)_
AT1G11180.3 11Arabidopsis thaliana9E-17629182880 (0)_
Os07g37740.1 7Oryza sativa1E-15431069800 (0)_
Os01g57220.1 7Oryza sativa4E-14829073850 (0)_
Os05g42330.1 7Oryza sativa8E-140288718417 (17)_
GRMZM2G041181_P01 3.21Zea mays1E-15930970811 (1)_
Zm00001eb324430_P001 agpv5Zea mays1E-15930970810 (0)_
v1_GRMZM2G041181_P01 4a53Zea mays1E-15930970811 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNase_Y_N(1) SCAMP(1)
TargetP: Cytoplasm (Class 4 C0.389; M0.098; S0.080; _0.691)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 289 aa (-cTP 270)
Molecular Weight 32.61 kDA(-cTP )
PI 8.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1420Detail        [A. thaliana]  
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1712Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1716Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17432890(leaf total membranes)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
21826108(SYP trans-Golgi-filtered)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help