PPDB

PPDB	The Plant Proteome Database

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AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein

Lab Annot.

ATP binding / DNA binding / helicase/ protein binding / zinc ion binding - EDA16 (embryo sac development arrest 16);
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G61140.3 11 Arabidopsis thaliana 0 1120 99 100 0 (0) _
AT1G61140.2 11 Arabidopsis thaliana 0 997 99 99 0 (0) _
AT1G11100.4 11 Arabidopsis thaliana 0 1318 58 69 0 (0) _
Os01g57110.2 7 Oryza sativa 0 865 59 70 0 (0) _
Os01g57110.1 7 Oryza sativa 0 865 59 70 0 (0) _
Os08g08220.2 7 Oryza sativa 0 871 52 65 0 (0) _
Zm00001eb431470_P001 agpv5 Zea mays 0 833 50 62 0 (0) _
GRMZM2G324781_P01 3.21 Zea mays 0 833 48 60 0 (0) _
v1_GRMZM2G324781_P01 4a53 Zea mays 0 733 46 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Helicase_C(1) Prok-RING_4(1) SNF2_N(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) z
TargetP:	Cytoplasm (Class 1 C0.072; M0.120; S0.075; _0.921)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1280 aa (-cTP 1264)
Molecular Weight	141.13 kDA(-cTP )
PI	5.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data